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STRINGSTRING
Phatrdraft477 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft477" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft477Predicted protein (82 aa)    
Predicted Functional Partners:
Phatr30160
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family (104 aa)
     
 
  0.999
Phatr28147
Predicted protein (62 aa)
     
 
  0.999
Phatr27125
Predicted protein (115 aa)
     
 
  0.999
Phatr23748
Predicted protein (67 aa)
     
 
  0.999
Phatr21073
Predicted protein (110 aa)
     
 
  0.999
Phatr30262
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family (192 aa)
     
 
  0.999
Phatr50886
Predicted protein (145 aa)
     
 
  0.999
Phatr43162
Predicted protein; Belongs to the universal ribosomal protein uL15 family (146 aa)
     
 
  0.999
Phatr31919
Predicted protein (305 aa)
     
 
  0.999
Phatr19413
Predicted protein; Belongs to the eukaryotic ribosomal protein eL38 family (69 aa)
     
 
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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