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Phatrdraft487 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft487" - Glycerol-3-phosphate dehydrogenase [NAD(+)] in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft487Glycerol-3-phosphate dehydrogenase [NAD(+)] (355 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.815
Phatr1129
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (562 aa)
   
 
  0.683
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
         
  0.571
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
   
 
  0.548
MPDC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes (415 aa)
     
   
  0.543
Phatr48864
Reductase with NAD or NADP as acceptor; Belongs to the 3-beta-HSD family (395 aa)
     
   
  0.539
Phatr44189
Predicted protein (1560 aa)
   
   
  0.497
Phatr50770
Predicted protein; Belongs to the FGGY kinase family (549 aa)
   
 
  0.491
Phatr12881
Predicted protein (438 aa)
   
 
  0.491
FbaC5
Fructose-bisphosphate aldolase (358 aa)
     
 
  0.463
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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