STRINGSTRING
Phatrdraft497 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft497" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft497Predicted protein (587 aa)    
Predicted Functional Partners:
Phatr5651
14-3-3-like protein (241 aa)
       
      0.524
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
 
  0.474
Phatr1690
Predicted protein (495 aa)
   
   
  0.453
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
         
  0.452
Phatr24739
Predicted protein (1594 aa)
         
  0.452
ACL
Atp-citrate synthase (1082 aa)
     
 
  0.450
Phatr45431
Predicted protein (1158 aa)
   
  0.445
Phatr23164
Predicted protein (489 aa)
     
 
  0.444
Phatr47992
Predicted protein (432 aa)
     
 
  0.440
NRPS
Non ribosomal peptide synthase (1367 aa)
   
   
  0.440
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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