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STRINGSTRING
Phatrdraft559 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft559" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft559Predicted protein (368 aa)    
Predicted Functional Partners:
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
   
  0.968
Phatr47576
Predicted protein (574 aa)
     
 
  0.957
Phatr14202
Diacylglycerol kinase (312 aa)
     
 
  0.955
Phatr43773
Predicted protein (398 aa)
     
 
  0.928
Phatr12431
Predicted protein (801 aa)
     
 
  0.919
Phatr7678
Predicted protein (134 aa)
         
 
0.800
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
   
 
  0.792
Phatr42446
Predicted protein (315 aa)
   
 
  0.792
Phatr11916
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (144 aa)
   
 
  0.792
Phatr20460
Predicted protein; Belongs to the membrane-bound acyltransferase family (499 aa)
     
 
  0.788
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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