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Phatrdraft645 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft645" - Acetyl-coenzyme A synthetase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft645Acetyl-coenzyme A synthetase (732 aa)    
Predicted Functional Partners:
MS
Malate synthase; Belongs to the malate synthase family (553 aa)
     
  0.978
Phatr16540
Predicted protein; Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (432 aa)
   
  0.974
Phatr23913
Acetyl-coa c-acetyltransferase; Belongs to the thiolase family (396 aa)
   
 
  0.962
ACC2
Biotin carboxylase (2282 aa)
   
  0.940
ACC1
Acetyl-coa carboxylase (2092 aa)
   
  0.940
Phatr44618
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family (663 aa)
   
 
  0.925
Phatr38362
2-isopropylmalate synthase (581 aa)
   
 
  0.925
Phatr51245
Carboxylase propionyl-coa carboxylase (664 aa)
   
  0.922
Phatr45886
Predicted protein (581 aa)
   
 
  0.922
DHLTA_4
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Dihydrolipoamide acetyl transferase (525 aa)
   
 
  0.913
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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