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STRINGSTRING
Phatrdraft741 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft741" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft741Predicted protein (559 aa)    
Predicted Functional Partners:
Phatr50303
Autophagy-related protein; Belongs to the ATG8 family (124 aa)
     
 
  0.946
Phatr8407
Predicted protein (65 aa)
     
 
  0.936
Phatr43544
Predicted protein (1265 aa)
     
 
  0.936
Phatr14103
Predicted protein (298 aa)
       
 
  0.804
Phatr31423
Predicted protein (357 aa)
     
 
  0.706
Phatr38130
Predicted protein; Belongs to the SNF7 family (199 aa)
     
   
  0.619
Phatr21147
Predicted protein (307 aa)
     
 
  0.605
Phatr49312
Predicted protein (1592 aa)
           
  0.582
Phatr30282
Predicted protein; Belongs to the PI3/PI4-kinase family (341 aa)
     
 
  0.506
Phatr15031
Predicted protein; Belongs to the PI3/PI4-kinase family (118 aa)
     
 
  0.506
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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