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STRINGSTRING
Phatrdraft765 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft765" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft765Predicted protein (475 aa)    
Predicted Functional Partners:
FAO1
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family (767 aa)
     
 
  0.506
Phatr35240
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (684 aa)
     
 
  0.506
Phatr18064
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (298 aa)
     
 
  0.506
Phatr44982
Predicted protein (203 aa)
         
  0.478
HAD2
3-hydroxyacyl-coenzyme A dehydrogenase (329 aa)
   
   
  0.471
Phatr54528
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family (385 aa)
     
 
  0.409
Phatr38724
Predicted protein (233 aa)
           
  0.407
Phatr42907
Acyl-coenzyme A dehydrogenase (443 aa)
   
   
  0.405
Phatr44584
Predicted protein (533 aa)
   
 
  0.405
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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