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STRINGSTRING
Phatrdraft79 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft79" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft79Predicted protein (444 aa)    
Predicted Functional Partners:
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
 
  0.889
Phatr10954
Predicted protein (209 aa)
     
 
  0.887
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3 (397 aa)
     
 
  0.841
APC3
Predicted protein (336 aa)
     
 
  0.840
APC10
Predicted protein (148 aa)
     
 
  0.827
APC8
Predicted protein (648 aa)
     
 
  0.827
APC6
Predicted protein (381 aa)
     
 
  0.824
Phatr10628
Serine/threonine-protein kinase PLK (575 aa)
     
 
  0.822
APC11
Predicted protein (82 aa)
     
 
  0.812
APC2
Predicted protein; Belongs to the cullin family (767 aa)
     
 
  0.804
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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