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Phatrdraft972 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft972" - Ammonium_transporter in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft972Ammonium_transporter (540 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
         
  0.773
Phatr24739
Predicted protein (1594 aa)
         
  0.715
Phatr51092
Glutamine synthetase (416 aa)
         
  0.663
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.660
CPS-II
Predicted protein (1542 aa)
   
   
  0.504
Phatr13951
Predicted protein (450 aa)
         
  0.483
GLNA
GLNA, glutamine synthase (716 aa)
         
  0.483
Phatr23830
Predicted protein; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (497 aa)
           
  0.463
Phatr36721
Predicted protein (323 aa)
       
 
  0.461
Phatr29702
Predicted protein (878 aa)
           
  0.426
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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