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Phatrdraft972 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft972" - Ammonium_transporter in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft972Ammonium_transporter (540 aa)    
Predicted Functional Partners:
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.785
Phatr51092
Glutamine synthetase (416 aa)
   
   
  0.736
Phatr38509
Arginase; Belongs to the arginase family (301 aa)
           
  0.598
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
           
  0.585
Phatr52619
Purine permease (593 aa)
     
   
  0.575
Phatr18945
Transport protein (562 aa)
           
  0.555
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.528
GltD
Synthase of glutamate synthase (580 aa)
   
   
  0.523
ISIP2B
Iron starvation induced protein (327 aa)
           
  0.463
GEL1
Gelsolin (403 aa)
           
  0.456
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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