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STRINGSTRING
Phatrdraft976 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft976" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft976Predicted protein (321 aa)    
Predicted Functional Partners:
Phatr22019
Predicted protein (437 aa)
   
   
  0.807
PHATR_843
Predicted protein (467 aa)
 
 
  0.754
Phatr51245
Carboxylase propionyl-coa carboxylase (664 aa)
 
 
  0.754
Phatr11021
Predicted protein (323 aa)
   
   
  0.635
HCL1
Hydroxymethylglutaryl-coenzyme A lyase (321 aa)
   
 
  0.501
HAD2
3-hydroxyacyl-coenzyme A dehydrogenase (329 aa)
   
   
  0.493
Phatr23913
Acetyl-coa c-acetyltransferase; Belongs to the thiolase family (396 aa)
   
   
  0.490
Phatr51830
Methylmalonyl-coa mutase (719 aa)
   
   
  0.482
GLXI
Lactyolglutathione lyase (310 aa)
   
   
  0.445
Phatr12878
Predicted protein (312 aa)
         
  0.443
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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