STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE68166.1Probable non-F420 flavinoid oxidoreductase. (352 aa)    
Predicted Functional Partners:
SFE68142.1
Trehalose synthase.
 
     0.828
SFE86253.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
  
     0.603
SFE68203.1
Uracil-xanthine permease.
  
    0.566
SFF08507.1
Extracellular solute-binding protein, family 3.
  
    0.563
SFE67907.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.539
SFF08530.1
Cation diffusion facilitator family transporter.
  
     0.532
SFF02158.1
FMN reductase.
  
  0.528
SFF01357.1
Sulfonate transport system substrate-binding protein.
   
 
  0.516
SFE86139.1
NitT/TauT family transport system substrate-binding protein.
   
 
  0.512
SFF27625.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.491
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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