STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF20440.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (374 aa)    
Predicted Functional Partners:
SFF10683.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.991
SFF10430.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.986
SFE80802.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.985
SFF35625.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.984
SFE80833.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.978
SFF09046.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.977
SFF24322.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.977
SFE71177.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.973
SFF21692.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.962
SFF35640.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.960
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.