STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF32932.1DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. (456 aa)    
Predicted Functional Partners:
ddl-2
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.936
SFF07177.1
Enoyl-CoA hydratase.
   
 
 0.846
SFF32965.1
Thioredoxin reductase (NADPH).
       0.703
SFF29839.1
2-oxoglutarate dehydrogenase E1 component.
   
 
  0.702
SFF32950.1
Thioredoxin; Belongs to the thioredoxin family.
       0.684
SFF32984.1
Hypothetical protein.
       0.526
SFF04036.1
Protein of unknown function.
  
     0.477
SFF33024.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
       0.474
SFF08470.1
Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
   
    0.430
SFF33012.1
Hypothetical protein.
       0.424
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.