STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_067200RNA helicase/RNAse III, putative; Belongs to the helicase family. Dicer subfamily. (1494 aa)    
Predicted Functional Partners:
TSTA_031910
Eukaryotic translation initiation factor eIF-2C4, putative.
   
 0.932
TSTA_058970
RNA interference and gene silencing protein (Qde2), putative.
   
 0.932
TSTA_013730
Eukaryotic translation initiation factor 2C, putative.
   
 0.882
TSTA_005050
37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.789
TSTA_118110
Mitochondrial ribosomal protein, putative.
  
 
 0.775
TSTA_073620
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.760
TSTA_063130
50S ribosomal subunit L30.
   
 
 0.757
TSTA_043280
37S ribosomal protein Mrp17.
   
 
 0.753
TSTA_114060
37S ribosomal protein S16.
  
 
 0.752
TSTA_074160
DUF1339 domain protein.
   
 0.751
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.