STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_05159Histone deacetylase 1/2. (1144 aa)    
Predicted Functional Partners:
PISL3812_08697
FAS1 domain-containing protein AFUA_8G05360.
   
 0.983
PISL3812_09309
Chromatin modification-related protein eaf3.
    
 0.975
PISL3812_04410
Histone acetyltransferase type B subunit 2.
   
 0.970
PISL3812_04789
F-box-like/WD repeat-containing protein TBL1XR1-A.
   
 0.954
PISL3812_09609
Myosin-13.
    
 0.954
PISL3812_09406
Uncharacterized protein.
   
 0.949
PISL3812_07125
mRNA_triPase domain-containing protein.
    
 0.944
PISL3812_04599
Chromatin remodeling factor mit1.
   
 0.938
PISL3812_08898
Ino eighty subunit 2.
    
 0.936
PISL3812_07018
Uncharacterized protein.
    
 0.929
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.