STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PISL3812_05956Translocation protein SEC62. (414 aa)    
Predicted Functional Partners:
PISL3812_06345
Translocation protein SEC63 homolog.
   
 0.995
PISL3812_04247
Protein transport protein SEC61 subunit alpha.
   
 
 0.978
PISL3812_00210
Uncharacterized protein.
    
 
 0.977
PISL3812_09251
Translocation protein sec66.
    
 
 0.977
PISL3812_07397
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.952
PISL3812_01570
Uncharacterized protein.
    
 
 0.924
PISL3812_04176
Uncharacterized protein.
    
 
 0.924
PISL3812_09146
Pre-mRNA-splicing helicase BRR2.
     
 0.808
PISL3812_04782
Uncharacterized protein.
     
 0.681
PISL3812_05650
Uncharacterized protein.
     
 0.681
Your Current Organism:
Talaromyces islandicus
NCBI taxonomy Id: 28573
Other names: ATCC 10127, CBS 338.48, IMI 040042, MUCL 31324, Penicillium islandicum, T. islandicus, Talaromyces islandicus (Sopp) Samson, Yilmaz, Frisvad & Seifert 2012
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.