STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g06877Uncharacterized protein. (1214 aa)    
Predicted Functional Partners:
GUK1-2
Guanylate kinase.
    
 0.852
SeMB42_g02835
Uncharacterized protein.
   
 0.765
SeMB42_g06839
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.699
SeMB42_g05727
Uncharacterized protein.
    
 0.691
SeMB42_g04468
L-lactate dehydrogenase.
    
 0.646
SeMB42_g01480
Uncharacterized protein.
    
  0.641
SeMB42_g02468
Uncharacterized protein.
    
 0.617
SeMB42_g01487
Ubiquitin-like domain-containing protein.
    
  0.617
SeMB42_g01287
Uncharacterized protein.
    
 0.616
SeMB42_g00211
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.591
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.