STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g06200F-box domain-containing protein. (556 aa)    
Predicted Functional Partners:
SeMB42_g04874
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.879
SeMB42_g01537
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.879
SeMB42_g03187
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.818
SeMB42_g01849
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.769
SeMB42_g01414
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.769
SeMB42_g02054
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.734
SeMB42_g05037
Adenylate kinase.
   
 
  0.709
SeMB42_g07079
Protein kinase domain-containing protein.
    
 
 0.681
SeMB42_g06778
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.666
SeMB42_g07412
Ubiquitin-like domain-containing protein.
    
  0.653
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.