STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04629Uncharacterized protein. (675 aa)    
Predicted Functional Partners:
SeMB42_g07200
Dolichyl-phosphate-mannose---protein mannosyltransferase.
     
 0.653
SeMB42_g05454
Dolichyl-phosphate-mannose---protein mannosyltransferase.
     
 0.653
SeMB42_g04703
Dolichyl-phosphate-mannose---protein mannosyltransferase.
     
 0.653
SeMB42_g00566
Uncharacterized protein.
     
 0.606
SeMB42_g05863
Uncharacterized protein.
     
 0.537
SeMB42_g07024
Uncharacterized protein.
   
 
 0.523
SeMB42_g05253
Hexosyltransferase.
   
 
 0.523
SeMB42_g00875
TPR_REGION domain-containing protein.
     
 0.522
SeMB42_g04119
GRIP domain-containing protein.
    
 
 0.493
SeMB42_g04597
Uncharacterized protein.
    
 
 0.445
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
Server load: low (24%) [HD]