STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g01988AH domain-containing protein. (375 aa)    
Predicted Functional Partners:
SeMB42_g01595
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.976
SeMB42_g07322
OrfB_Zn_ribbon domain-containing protein.
    
 0.823
SeMB42_g04981
Uncharacterized protein.
   
 0.716
SeMB42_g07232
Uncharacterized protein.
   
 0.716
SeMB42_g03654
Uncharacterized protein.
   
 0.716
SeMB42_g06958
Uncharacterized protein.
   
 0.716
SeMB42_g00557
Uncharacterized protein.
   
 0.712
SeMB42_g07678
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.695
SeMB42_g01534
Uncharacterized protein.
   
 0.695
SeMB42_g02648
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
  0.690
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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