STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g00899HORMA domain-containing protein. (246 aa)    
Predicted Functional Partners:
SeMB42_g05497
DNA polymerase.
    
 0.999
SeMB42_g05395
DNA-directed DNA polymerase.
   
 0.997
SeMB42_g02552
DNA-directed DNA polymerase.
   
 0.982
SeMB42_g06014
DNA-directed DNA polymerase.
    
 
 0.956
SENM137
DNA-directed DNA polymerase.
   
 0.944
SeMB42_g06878
DNA polymerase.
    
 0.933
SENM978
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.930
SeMB42_g04450
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.922
SeMB42_g04825
DNA polymerase.
    
 0.915
SeMB42_g03832
Uncharacterized protein.
    
 0.915
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.