STRINGSTRING
DR97_1038 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_1038" - Carbon storage regulator homolog in Pseudomonas aeruginosa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DR97_1038Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (61 aa)    
Predicted Functional Partners:
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (82 aa)
     
 
  0.970
rpoS
rpoS_proteo- RNA polymerase sigma factor RpoS (334 aa)
           
  0.963
gacA
annotation not available (214 aa)
   
     
  0.947
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (434 aa)
           
  0.919
gacS
annotation not available (925 aa)
         
  0.891
dksA_2
RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression (148 aa)
   
   
  0.886
lysC
Aspartokinase; Asp_kin_monofn- aspartate kinase, monofunctional class; Belongs to the aspartokinase family (412 aa)
       
  0.864
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (240 aa)
           
  0.863
fliC
A-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (394 aa)
 
 
 
  0.830
DR97_2915
dksA- RNA polymerase-binding protein DksA (134 aa)
     
   
  0.809
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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