Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DR97_1060 | DR97_1061 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | 0.997 |
DR97_1060 | DR97_1062 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | annotation not available | 0.933 |
DR97_1060 | DR97_1063 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | Ring-cleaving dioxygenase; Virulence protein STM3117 | 0.697 |
DR97_1060 | DR97_1064 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | acyl-CoA dehydrogenase, N-terminal domain protein | 0.913 |
DR97_1060 | DR97_1065 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | Itaconyl-coa hydratase / mesaconyl-c4 coa hydratase; N-terminal half of MaoC dehydratase family protein | 0.991 |
DR97_1060 | DR97_1066 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.759 |
DR97_1061 | DR97_1060 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | 0.997 |
DR97_1061 | DR97_1062 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | annotation not available | 0.925 |
DR97_1061 | DR97_1063 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | Ring-cleaving dioxygenase; Virulence protein STM3117 | 0.598 |
DR97_1061 | DR97_1064 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | acyl-CoA dehydrogenase, N-terminal domain protein | 0.935 |
DR97_1061 | DR97_1065 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | Itaconyl-coa hydratase / mesaconyl-c4 coa hydratase; N-terminal half of MaoC dehydratase family protein | 0.990 |
DR97_1061 | DR97_1066 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.732 |
DR97_1062 | DR97_1060 | annotation not available | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | 0.933 |
DR97_1062 | DR97_1061 | annotation not available | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | 0.925 |
DR97_1062 | DR97_1063 | annotation not available | Ring-cleaving dioxygenase; Virulence protein STM3117 | 0.863 |
DR97_1062 | DR97_1064 | annotation not available | acyl-CoA dehydrogenase, N-terminal domain protein | 0.946 |
DR97_1062 | DR97_1065 | annotation not available | Itaconyl-coa hydratase / mesaconyl-c4 coa hydratase; N-terminal half of MaoC dehydratase family protein | 0.938 |
DR97_1062 | DR97_1066 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.870 |
DR97_1063 | DR97_1060 | Ring-cleaving dioxygenase; Virulence protein STM3117 | Hpch/hpai aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family | 0.697 |
DR97_1063 | DR97_1061 | Ring-cleaving dioxygenase; Virulence protein STM3117 | Coa-transferase iii family protein; Belongs to the CoA-transferase III family | 0.598 |
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