gltC_1 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

gltC_1

annotation not available (298 aa)

Predicted Functional Partners:

DR97_1065

0.886

DR97_1062

0.870

DR97_1064

0.813

DR97_1060

0.767

DR97_1061

0.732

DR97_3240

0.571

cynR_2

0.560

DR97_1063

0.494

DR97_5011

0.490

DR97_2805

0.481

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1060	DR97_1061	DR97_1060	DR97_1061	annotation not available	annotation not available	0.997
DR97_1060	DR97_1062	DR97_1060	DR97_1062	annotation not available	annotation not available	0.932
DR97_1060	DR97_1063	DR97_1060	DR97_1063	annotation not available	Virulence protein STM3117	0.699
DR97_1060	DR97_1064	DR97_1060	DR97_1064	annotation not available	acyl-CoA dehydrogenase, N-terminal domain protein	0.914
DR97_1060	DR97_1065	DR97_1060	DR97_1065	annotation not available	N-terminal half of MaoC dehydratase family protein	0.990
DR97_1060	gltC_1	DR97_1060	DR97_1066	annotation not available	annotation not available	0.767
DR97_1061	DR97_1060	DR97_1061	DR97_1060	annotation not available	annotation not available	0.997
DR97_1061	DR97_1062	DR97_1061	DR97_1062	annotation not available	annotation not available	0.925
DR97_1061	DR97_1063	DR97_1061	DR97_1063	annotation not available	Virulence protein STM3117	0.598
DR97_1061	DR97_1064	DR97_1061	DR97_1064	annotation not available	acyl-CoA dehydrogenase, N-terminal domain protein	0.926
DR97_1061	DR97_1065	DR97_1061	DR97_1065	annotation not available	N-terminal half of MaoC dehydratase family protein	0.990
DR97_1061	gltC_1	DR97_1061	DR97_1066	annotation not available	annotation not available	0.732
DR97_1062	DR97_1060	DR97_1062	DR97_1060	annotation not available	annotation not available	0.932
DR97_1062	DR97_1061	DR97_1062	DR97_1061	annotation not available	annotation not available	0.925
DR97_1062	DR97_1063	DR97_1062	DR97_1063	annotation not available	Virulence protein STM3117	0.863
DR97_1062	DR97_1064	DR97_1062	DR97_1064	annotation not available	acyl-CoA dehydrogenase, N-terminal domain protein	0.946
DR97_1062	DR97_1065	DR97_1062	DR97_1065	annotation not available	N-terminal half of MaoC dehydratase family protein	0.937
DR97_1062	gltC_1	DR97_1062	DR97_1066	annotation not available	annotation not available	0.870
DR97_1063	DR97_1060	DR97_1063	DR97_1060	Virulence protein STM3117	annotation not available	0.699
DR97_1063	DR97_1061	DR97_1063	DR97_1061	Virulence protein STM3117	annotation not available	0.598

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