Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2331 | DR97_3845 | DR97_2331 | DR97_3845 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.925 |
DR97_2331 | Pcd | DR97_2331 | DR97_917 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.925 |
DR97_2331 | PchA | DR97_2331 | DR97_2250 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.926 |
DR97_2331 | ackA | DR97_2331 | DR97_1108 | annotation not available | Putative acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction | 0.940 |
DR97_2331 | acsA1 | DR97_2331 | DR97_1056 | annotation not available | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.941 |
DR97_2331 | acsA2 | DR97_2331 | DR97_2076 | annotation not available | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.941 |
DR97_2331 | exaC | DR97_2331 | DR97_5863 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.925 |
DR97_2331 | pauA | DR97_2331 | DR97_928 | annotation not available | annotation not available | 0.902 |
DR97_2331 | poxB | DR97_2331 | DR97_2668 | annotation not available | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | 0.923 |
DR97_2331 | pta | DR97_2331 | DR97_1109 | annotation not available | Phosphate acetyltransferase; Involved in acetate metabolism. In combination with LdhA and AckA, allows fermentation of pyruvate, enhancing long-term survival under anaerobic conditions | 0.987 |
DR97_3845 | DR97_2331 | DR97_3845 | DR97_2331 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.925 |
DR97_3845 | ackA | DR97_3845 | DR97_1108 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Putative acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction | 0.956 |
DR97_3845 | acsA1 | DR97_3845 | DR97_1056 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.948 |
DR97_3845 | acsA2 | DR97_3845 | DR97_2076 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Acetyl-coa synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA | 0.949 |
DR97_3845 | exaC | DR97_3845 | DR97_5863 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.801 |
DR97_3845 | pauA | DR97_3845 | DR97_928 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.925 |
DR97_3845 | poxB | DR97_3845 | DR97_2668 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Thiamine pyrophosphate enzyme, central domain protein; Belongs to the TPP enzyme family | 0.911 |
DR97_3845 | pta | DR97_3845 | DR97_1109 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Phosphate acetyltransferase; Involved in acetate metabolism. In combination with LdhA and AckA, allows fermentation of pyruvate, enhancing long-term survival under anaerobic conditions | 0.630 |
Pcd | DR97_2331 | DR97_917 | DR97_2331 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.925 |
Pcd | PchA | DR97_917 | DR97_2250 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.822 |
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