Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1111 | YcbL | DR97_1111 | DR97_1112 | annotation not available | annotation not available | 0.700 |
DR97_1111 | oruR | DR97_1111 | DR97_1113 | annotation not available | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.415 |
DR97_1114 | DR97_3858 | DR97_1114 | DR97_3858 | annotation not available | annotation not available | 0.644 |
DR97_1114 | DR97_399 | DR97_1114 | DR97_399 | annotation not available | Belongs to the short-chain dehydrogenases/reductases (SDR) family | 0.673 |
DR97_1114 | YcbL | DR97_1114 | DR97_1112 | annotation not available | annotation not available | 0.426 |
DR97_1114 | oruR | DR97_1114 | DR97_1113 | annotation not available | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.789 |
DR97_1922 | DctP | DR97_1922 | DR97_1059 | C4-dicarboxylate-binding periplasmic protein; dctP: TRAP transporter solute receptor, DctP family protein | C4-dicarboxylate-binding periplasmic protein; dctP: TRAP transporter solute receptor, DctP family protein | 0.806 |
DR97_1922 | oruR | DR97_1922 | DR97_1113 | C4-dicarboxylate-binding periplasmic protein; dctP: TRAP transporter solute receptor, DctP family protein | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.485 |
DR97_3858 | DR97_1114 | DR97_3858 | DR97_1114 | annotation not available | annotation not available | 0.644 |
DR97_3858 | DR97_394 | DR97_3858 | DR97_394 | annotation not available | annotation not available | 0.728 |
DR97_3858 | DR97_399 | DR97_3858 | DR97_399 | annotation not available | Belongs to the short-chain dehydrogenases/reductases (SDR) family | 0.522 |
DR97_3858 | oruR | DR97_3858 | DR97_1113 | annotation not available | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.403 |
DR97_394 | DR97_3858 | DR97_394 | DR97_3858 | annotation not available | annotation not available | 0.728 |
DR97_394 | DR97_399 | DR97_394 | DR97_399 | annotation not available | Belongs to the short-chain dehydrogenases/reductases (SDR) family | 0.718 |
DR97_394 | oruR | DR97_394 | DR97_1113 | annotation not available | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.463 |
DR97_399 | DR97_1114 | DR97_399 | DR97_1114 | Belongs to the short-chain dehydrogenases/reductases (SDR) family | annotation not available | 0.673 |
DR97_399 | DR97_3858 | DR97_399 | DR97_3858 | Belongs to the short-chain dehydrogenases/reductases (SDR) family | annotation not available | 0.522 |
DR97_399 | DR97_394 | DR97_399 | DR97_394 | Belongs to the short-chain dehydrogenases/reductases (SDR) family | annotation not available | 0.718 |
DR97_399 | oruR | DR97_399 | DR97_1113 | Belongs to the short-chain dehydrogenases/reductases (SDR) family | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | 0.403 |
DctP | DR97_1922 | DR97_1059 | DR97_1922 | C4-dicarboxylate-binding periplasmic protein; dctP: TRAP transporter solute receptor, DctP family protein | C4-dicarboxylate-binding periplasmic protein; dctP: TRAP transporter solute receptor, DctP family protein | 0.806 |
page 1 of 2