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dehII protein (Pseudomonas aeruginosa) - STRING interaction network
"dehII" - HAD_type_II: haloacid dehalogenase, type II in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dehIIHAD_type_II- haloacid dehalogenase, type II (233 aa)    
Predicted Functional Partners:
alh-9
annotation not available (497 aa)
         
  0.900
yfmT
annotation not available (489 aa)
         
  0.900
serB
serB- phosphoserine phosphatase SerB (404 aa)
         
  0.882
pchP
annotation not available (349 aa)
 
     
  0.879
thrH
HSK-PSP- phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein (205 aa)
         
  0.863
DR97_791
HAD-SF-IB- HAD phosphoserine phosphatase-like hydrolase, IB family protein (217 aa)
         
  0.862
DR97_5760
annotation not available (300 aa)
 
   
  0.846
gph1
PGP_bact- phosphoglycolate phosphatase, bacterial (272 aa)
         
  0.810
DR97_1171
annotation not available (415 aa)
   
        0.774
DR97_1170
Uncharacterized protein (431 aa)
   
        0.758
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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