Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CepA | feoB | DR97_3902 | DR97_1534 | Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family | Ferrous iron transport protein b; Probable transporter of a GTP-driven Fe(2+) uptake system | 0.496 |
CepA | mntH2 | DR97_3902 | DR97_1173 | Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.609 |
DR97_1169 | DR97_1170 | DR97_1169 | DR97_1170 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.591 |
DR97_1169 | DR97_1171 | DR97_1169 | DR97_1171 | annotation not available | annotation not available | 0.591 |
DR97_1169 | dehII | DR97_1169 | DR97_1172 | annotation not available | HAD_type_II: haloacid dehalogenase, type II | 0.446 |
DR97_1169 | mntH2 | DR97_1169 | DR97_1173 | annotation not available | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.620 |
DR97_1170 | DR97_1169 | DR97_1170 | DR97_1169 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.591 |
DR97_1170 | DR97_1171 | DR97_1170 | DR97_1171 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.926 |
DR97_1170 | dehII | DR97_1170 | DR97_1172 | Hypothetical protein; Uncharacterized protein | HAD_type_II: haloacid dehalogenase, type II | 0.758 |
DR97_1170 | mntH2 | DR97_1170 | DR97_1173 | Hypothetical protein; Uncharacterized protein | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.774 |
DR97_1171 | DR97_1169 | DR97_1171 | DR97_1169 | annotation not available | annotation not available | 0.591 |
DR97_1171 | DR97_1170 | DR97_1171 | DR97_1170 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.926 |
DR97_1171 | dehII | DR97_1171 | DR97_1172 | annotation not available | HAD_type_II: haloacid dehalogenase, type II | 0.774 |
DR97_1171 | mntH2 | DR97_1171 | DR97_1173 | annotation not available | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.790 |
DR97_6026 | mntH2 | DR97_6026 | DR97_1173 | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.591 |
dehII | DR97_1169 | DR97_1172 | DR97_1169 | HAD_type_II: haloacid dehalogenase, type II | annotation not available | 0.446 |
dehII | DR97_1170 | DR97_1172 | DR97_1170 | HAD_type_II: haloacid dehalogenase, type II | Hypothetical protein; Uncharacterized protein | 0.758 |
dehII | DR97_1171 | DR97_1172 | DR97_1171 | HAD_type_II: haloacid dehalogenase, type II | annotation not available | 0.774 |
dehII | mntH2 | DR97_1172 | DR97_1173 | HAD_type_II: haloacid dehalogenase, type II | Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system | 0.604 |
feoB | CepA | DR97_1534 | DR97_3902 | Ferrous iron transport protein b; Probable transporter of a GTP-driven Fe(2+) uptake system | Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family | 0.496 |
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