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DR97_1308 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_1308" - topB: DNA topoisomerase III family protein in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1308topB- DNA topoisomerase III family protein (671 aa)    
Predicted Functional Partners:
DR97_5513
Relaxase; ICE_TraI_Pfluor- integrating conjugative element relaxase, PFGI-1 class (604 aa)
 
     
  0.903
DR97_5522
annotation not available (164 aa)
 
     
  0.893
yedA
2A78- carboxylate/amino acid/amine transporter family protein (286 aa)
   
   
  0.886
DR97_2690
Radc- DNA repair RadC family protein; Belongs to the UPF0758 family (224 aa)
 
     
  0.884
DR97_1261
Uncharacterized protein; ICE_TraI_Pfluor- integrating conjugative element relaxase, PFGI-1 class (616 aa)
 
     
  0.884
DR97_2128
annotation not available (296 aa)
   
   
  0.857
DR97_1840
Relaxase; ICE_TraI_Pfluor- integrating conjugative element relaxase, PFGI-1 class (639 aa)
 
     
  0.856
DR97_1310
annotation not available (127 aa)
 
 
  0.838
inrR
Uncharacterized protein ORF C103 (175 aa)
 
     
  0.819
DR97_1312
Integrating conjugative element protein (262 aa)
 
        0.787
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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