Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ClpA | DR97_1328 | DR97_3426 | DR97_1328 | Atp-dependent clp protease atp-binding subunit clpc; Belongs to the ClpA/ClpB family | annotation not available | 0.826 |
ClpA | dnaK | DR97_3426 | DR97_2105 | Atp-dependent clp protease atp-binding subunit clpc; Belongs to the ClpA/ClpB family | Molecular chaperone dnak; Acts as a chaperone | 0.825 |
ClpA | hspA | DR97_3426 | DR97_1329 | Atp-dependent clp protease atp-binding subunit clpc; Belongs to the ClpA/ClpB family | annotation not available | 0.655 |
DR97_1326 | DR97_1327 | DR97_1326 | DR97_1327 | annotation not available | annotation not available | 0.836 |
DR97_1326 | DR97_1328 | DR97_1326 | DR97_1328 | annotation not available | annotation not available | 0.924 |
DR97_1326 | dnaK | DR97_1326 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.595 |
DR97_1326 | hspA | DR97_1326 | DR97_1329 | annotation not available | annotation not available | 0.881 |
DR97_1327 | DR97_1326 | DR97_1327 | DR97_1326 | annotation not available | annotation not available | 0.836 |
DR97_1327 | DR97_1328 | DR97_1327 | DR97_1328 | annotation not available | annotation not available | 0.818 |
DR97_1327 | hspA | DR97_1327 | DR97_1329 | annotation not available | annotation not available | 0.609 |
DR97_1327 | rlmE | DR97_1327 | DR97_2096 | annotation not available | 23S rRNA (uridine2552-2'-O)-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit | 0.424 |
DR97_1328 | ClpA | DR97_1328 | DR97_3426 | annotation not available | Atp-dependent clp protease atp-binding subunit clpc; Belongs to the ClpA/ClpB family | 0.826 |
DR97_1328 | DR97_1326 | DR97_1328 | DR97_1326 | annotation not available | annotation not available | 0.924 |
DR97_1328 | DR97_1327 | DR97_1328 | DR97_1327 | annotation not available | annotation not available | 0.818 |
DR97_1328 | atpA | DR97_1328 | DR97_2935 | annotation not available | F-type h+/na+-transporting atpase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit | 0.843 |
DR97_1328 | dnaK | DR97_1328 | DR97_2105 | annotation not available | Molecular chaperone dnak; Acts as a chaperone | 0.882 |
DR97_1328 | hflC | DR97_1328 | DR97_2294 | annotation not available | Modulator of ftsh protease hflc; HflC and HflK could regulate a protease | 0.964 |
DR97_1328 | hflK | DR97_1328 | DR97_2295 | annotation not available | Modulator of ftsh protease hflk; HflC and HflK could encode or regulate a protease | 0.953 |
DR97_1328 | hspA | DR97_1328 | DR97_1329 | annotation not available | annotation not available | 0.827 |
DR97_1328 | lpxC | DR97_1328 | DR97_1584 | annotation not available | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis | 0.806 |
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