STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_138annotation not available (229 aa)    
Predicted Functional Partners:
PhaJ1
annotation not available
  
 0.992
FadE
acyl-CoA dehydrogenase, N-terminal domain protein
   
 0.970
DR97_5620
Putative acyl-coa dehydrogenase; Acyl-CoA dehydrogenase family member 10; acyl-CoA dehydrogenase, N-terminal domain protein
  
 0.968
pcaF
Beta-ketoadipyl coa thiolase; Catalyzes thiolytic cleavage of beta-ketoadipyl-CoA to succinyl-CoA and acetyl-CoA
  
 0.963
DR97_1613
Putative acyl-coa dehydrogenase; Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein
  
 0.958
DR97_2375
Putative acyl-coa dehydrogenase; acyl-CoA dehydrogenase, N-terminal domain protein
  
 0.958
DR97_3893
Putative acyl-coa dehydrogenase; acyl-CoA dehydrogenase, C-terminal domain protein
  
 0.957
LcaD
Putative acyl-coa dehydrogenase; Long-chain specific acyl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein
  
 0.957
DR97_922
acyl-CoA dehydrogenase, N-terminal domain protein
  
 0.955
DR97_924
Uncharacterized protein; acyl-CoA dehydrogenase, C-terminal domain protein
  
 0.953
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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