STRINGSTRING
int5 protein (Pseudomonas aeruginosa) - STRING interaction network
"int5" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
int5annotation not available (327 aa)    
Predicted Functional Partners:
DR97_1389
Uncharacterized protein (430 aa)
 
        0.926
DR97_1391
annotation not available (384 aa)
              0.531
DR97_1390
annotation not available (36 aa)
              0.524
PACL_0513
Uncharacterized protein (430 aa)
 
          0.521
xerD
recomb_XerD- tyrosine recombinase XerD (298 aa)
 
   
  0.517
xerC
recomb_XerC- tyrosine recombinase XerC; Belongs to the ’phage’ integrase family. XerC subfamily (303 aa)
   
     
  0.490
DR97_1342
portal_PBSX- phage portal protein, PBSX family (351 aa)
 
   
  0.454
DR97_1365
tape_meas_TP901- phage tail tape measure protein, TP901 family, core region (919 aa)
 
   
  0.422
DR97_1343
annotation not available (593 aa)
 
        0.402
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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