Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HplR | HplW | DR97_5283 | DR97_5288 | annotation not available | annotation not available | 0.877 |
HplR | HxcP | DR97_5283 | DR97_1440 | annotation not available | annotation not available | 0.850 |
HplR | HxcQ | DR97_5283 | DR97_1434 | annotation not available | type_II_gspD: type II secretion system protein D | 0.985 |
HplR | HxcU | DR97_5283 | DR97_1441 | annotation not available | General secretion pathway protein h; typeII_sec_gspH: type II secretion system protein H | 0.690 |
HplR | HxcV | DR97_5283 | DR97_1439 | annotation not available | General secretion pathway protein i; gspI: type II secretion system protein I | 0.646 |
HplR | HxcW | DR97_5283 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.930 |
HplR | HxcY | DR97_5283 | DR97_1436 | annotation not available | annotation not available | 0.584 |
HplR | HxcZ | DR97_5283 | DR97_1435 | annotation not available | annotation not available | 0.537 |
HplR | xqhA | DR97_5283 | DR97_7 | annotation not available | General secretion pathway protein d; type_II_gspD: type II secretion system protein D | 0.982 |
HplW | HplR | DR97_5288 | DR97_5283 | annotation not available | annotation not available | 0.877 |
HplW | HxcQ | DR97_5288 | DR97_1434 | annotation not available | type_II_gspD: type II secretion system protein D | 0.572 |
HplW | HxcW | DR97_5288 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.916 |
HplW | HxcZ | DR97_5288 | DR97_1435 | annotation not available | annotation not available | 0.418 |
HplW | xqhA | DR97_5288 | DR97_7 | annotation not available | General secretion pathway protein d; type_II_gspD: type II secretion system protein D | 0.560 |
HxcP | HplR | DR97_1440 | DR97_5283 | annotation not available | annotation not available | 0.850 |
HxcP | HxcQ | DR97_1440 | DR97_1434 | annotation not available | type_II_gspD: type II secretion system protein D | 0.925 |
HxcP | HxcU | DR97_1440 | DR97_1441 | annotation not available | General secretion pathway protein h; typeII_sec_gspH: type II secretion system protein H | 0.945 |
HxcP | HxcV | DR97_1440 | DR97_1439 | annotation not available | General secretion pathway protein i; gspI: type II secretion system protein I | 0.851 |
HxcP | HxcW | DR97_1440 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.992 |
HxcP | HxcX | DR97_1440 | DR97_1437 | annotation not available | annotation not available | 0.832 |
page 1 of 5