Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1420 | DR97_1428 | DR97_1420 | DR97_1428 | annotation not available | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | 0.823 |
DR97_1420 | HxcP | DR97_1420 | DR97_1440 | annotation not available | annotation not available | 0.780 |
DR97_1420 | HxcU | DR97_1420 | DR97_1441 | annotation not available | General secretion pathway protein h; typeII_sec_gspH: type II secretion system protein H | 0.751 |
DR97_1420 | HxcW | DR97_1420 | DR97_1442 | annotation not available | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.774 |
DR97_1420 | HxcX | DR97_1420 | DR97_1437 | annotation not available | annotation not available | 0.731 |
DR97_1420 | PigB | DR97_1420 | DR97_1446 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.789 |
DR97_1420 | phoA2 | DR97_1420 | DR97_1431 | annotation not available | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.775 |
DR97_1420 | vreA | DR97_1420 | DR97_1445 | annotation not available | Hypothetical protein; VreA; Secretin and TonB N terminus short domain protein | 0.799 |
DR97_1420 | vreI | DR97_1420 | DR97_1444 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.756 |
DR97_1420 | vreR | DR97_1420 | DR97_1443 | annotation not available | annotation not available | 0.640 |
DR97_1428 | DR97_1420 | DR97_1428 | DR97_1420 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | annotation not available | 0.823 |
DR97_1428 | HxcP | DR97_1428 | DR97_1440 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | annotation not available | 0.821 |
DR97_1428 | HxcU | DR97_1428 | DR97_1441 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | General secretion pathway protein h; typeII_sec_gspH: type II secretion system protein H | 0.823 |
DR97_1428 | HxcW | DR97_1428 | DR97_1442 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | Putative type ii secretion system protein; Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.807 |
DR97_1428 | HxcX | DR97_1428 | DR97_1437 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | annotation not available | 0.768 |
DR97_1428 | PigB | DR97_1428 | DR97_1446 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | Hypothetical protein; Uncharacterized protein | 0.847 |
DR97_1428 | phoA2 | DR97_1428 | DR97_1431 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.902 |
DR97_1428 | vreA | DR97_1428 | DR97_1445 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | Hypothetical protein; VreA; Secretin and TonB N terminus short domain protein | 0.798 |
DR97_1428 | vreI | DR97_1428 | DR97_1444 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.783 |
DR97_1428 | vreR | DR97_1428 | DR97_1443 | Hypothetical protein; Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein | annotation not available | 0.678 |
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