pigB protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

Your Input:

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[Homology]

Score

pigB

Uncharacterized protein (106 aa)

Predicted Functional Partners:

vreA

0.912

vreI

0.910

DR97_1428

0.847

hxcP

0.842

hxcW

0.818

DR97_1431

0.810

hxcX

0.800

hxcU

0.797

vreR

0.793

DR97_1420

0.789

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1420	DR97_1428	DR97_1420	DR97_1428	annotation not available	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	0.823
DR97_1420	DR97_1431	DR97_1420	DR97_1431	annotation not available	annotation not available	0.775
DR97_1420	hxcP	DR97_1420	DR97_1440	annotation not available	annotation not available	0.780
DR97_1420	hxcU	DR97_1420	DR97_1441	annotation not available	typeII_sec_gspH: type II secretion system protein H	0.751
DR97_1420	hxcW	DR97_1420	DR97_1442	annotation not available	Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein	0.774
DR97_1420	hxcX	DR97_1420	DR97_1437	annotation not available	annotation not available	0.731
DR97_1420	pigB	DR97_1420	DR97_1446	annotation not available	Uncharacterized protein	0.789
DR97_1420	vreA	DR97_1420	DR97_1445	annotation not available	VreA; Secretin and TonB N terminus short domain protein	0.799
DR97_1420	vreI	DR97_1420	DR97_1444	annotation not available	sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein	0.756
DR97_1420	vreR	DR97_1420	DR97_1443	annotation not available	annotation not available	0.640
DR97_1428	DR97_1420	DR97_1428	DR97_1420	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	annotation not available	0.823
DR97_1428	DR97_1431	DR97_1428	DR97_1431	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	annotation not available	0.899
DR97_1428	hxcP	DR97_1428	DR97_1440	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	annotation not available	0.821
DR97_1428	hxcU	DR97_1428	DR97_1441	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	typeII_sec_gspH: type II secretion system protein H	0.824
DR97_1428	hxcW	DR97_1428	DR97_1442	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	Uncharacterized protein; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein	0.807
DR97_1428	hxcX	DR97_1428	DR97_1437	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	annotation not available	0.768
DR97_1428	pigB	DR97_1428	DR97_1446	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	Uncharacterized protein	0.847
DR97_1428	vreA	DR97_1428	DR97_1445	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	VreA; Secretin and TonB N terminus short domain protein	0.798
DR97_1428	vreI	DR97_1428	DR97_1444	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein	0.782
DR97_1428	vreR	DR97_1428	DR97_1443	Uncharacterized protein; adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein	annotation not available	0.679

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