Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1461 | DR97_1462 | DR97_1461 | DR97_1462 | annotation not available | annotation not available | 0.591 |
DR97_1461 | DR97_1463 | DR97_1461 | DR97_1463 | annotation not available | annotation not available | 0.423 |
DR97_1461 | recB | DR97_1461 | DR97_1459 | annotation not available | Exodeoxyribonuclease v beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...] | 0.724 |
DR97_1461 | recC | DR97_1461 | DR97_1460 | annotation not available | Exodeoxyribonuclease v gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] | 0.742 |
DR97_1461 | recD | DR97_1461 | DR97_1458 | annotation not available | Exodeoxyribonuclease v alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] | 0.713 |
DR97_1462 | DR97_1461 | DR97_1462 | DR97_1461 | annotation not available | annotation not available | 0.591 |
DR97_1462 | DR97_1463 | DR97_1462 | DR97_1463 | annotation not available | annotation not available | 0.804 |
DR97_1462 | DR97_2486 | DR97_1462 | DR97_2486 | annotation not available | annotation not available | 0.434 |
DR97_1462 | atsA | DR97_1462 | DR97_3139 | annotation not available | Arylsulfatase; Hydrolyzes the bond between sulfate and the aromatic ring in a compound such as 4-nitrocatechol sulfate | 0.407 |
DR97_1462 | chr | DR97_1462 | DR97_1465 | annotation not available | Transporter; 2A51: chromate transporter, chromate ion transporter family protein | 0.479 |
DR97_1462 | pheT | DR97_1462 | DR97_5223 | annotation not available | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.405 |
DR97_1462 | recB | DR97_1462 | DR97_1459 | annotation not available | Exodeoxyribonuclease v beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...] | 0.516 |
DR97_1462 | recC | DR97_1462 | DR97_1460 | annotation not available | Exodeoxyribonuclease v gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] | 0.531 |
DR97_1462 | recD | DR97_1462 | DR97_1458 | annotation not available | Exodeoxyribonuclease v alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] | 0.499 |
DR97_1463 | DR97_1461 | DR97_1463 | DR97_1461 | annotation not available | annotation not available | 0.423 |
DR97_1463 | DR97_1462 | DR97_1463 | DR97_1462 | annotation not available | annotation not available | 0.804 |
DR97_1463 | chr | DR97_1463 | DR97_1465 | annotation not available | Transporter; 2A51: chromate transporter, chromate ion transporter family protein | 0.665 |
DR97_2486 | DR97_1462 | DR97_2486 | DR97_1462 | annotation not available | annotation not available | 0.434 |
atsA | DR97_1462 | DR97_3139 | DR97_1462 | Arylsulfatase; Hydrolyzes the bond between sulfate and the aromatic ring in a compound such as 4-nitrocatechol sulfate | annotation not available | 0.407 |
chr | DR97_1462 | DR97_1465 | DR97_1462 | Transporter; 2A51: chromate transporter, chromate ion transporter family protein | annotation not available | 0.479 |
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