Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1469 | cpaB | DR97_1469 | DR97_1480 | annotation not available | pilus_cpaB: Flp pilus assembly protein CpaB | 0.867 |
DR97_1469 | fppA | DR97_1469 | DR97_1470 | annotation not available | annotation not available | 0.937 |
DR97_1469 | pprA | DR97_1469 | DR97_1468 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PprB | 0.981 |
DR97_1469 | pprB | DR97_1469 | DR97_1471 | annotation not available | Bacterial regulatory s, luxr family protein; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a transcription regulator by direct binding to promoter regions . Negatively regulates its own transcription | 0.887 |
DR97_1469 | tadG | DR97_1469 | DR97_1472 | annotation not available | annotation not available | 0.923 |
DR97_3569 | DR97_3759 | DR97_3569 | DR97_3759 | annotation not available | annotation not available | 0.898 |
DR97_3569 | aruS | DR97_3569 | DR97_2335 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Probably functions as a sensor kinase that phosphorylates AruR | 0.927 |
DR97_3569 | bvgS | DR97_3569 | DR97_3920 | annotation not available | annotation not available | 0.954 |
DR97_3569 | gacS | DR97_3569 | DR97_1011 | annotation not available | annotation not available | 0.963 |
DR97_3569 | pprA | DR97_3569 | DR97_1468 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PprB | 0.918 |
DR97_3569 | pprB | DR97_3569 | DR97_1471 | annotation not available | Bacterial regulatory s, luxr family protein; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a transcription regulator by direct binding to promoter regions . Negatively regulates its own transcription | 0.618 |
DR97_3759 | DR97_3569 | DR97_3759 | DR97_3569 | annotation not available | annotation not available | 0.898 |
DR97_3759 | aruS | DR97_3759 | DR97_2335 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Probably functions as a sensor kinase that phosphorylates AruR | 0.852 |
DR97_3759 | bvgS | DR97_3759 | DR97_3920 | annotation not available | annotation not available | 0.914 |
DR97_3759 | gacS | DR97_3759 | DR97_1011 | annotation not available | annotation not available | 0.991 |
DR97_3759 | pprA | DR97_3759 | DR97_1468 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PprB | 0.817 |
DR97_3759 | pprB | DR97_3759 | DR97_1471 | annotation not available | Bacterial regulatory s, luxr family protein; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a transcription regulator by direct binding to promoter regions . Negatively regulates its own transcription | 0.802 |
aruS | DR97_3569 | DR97_2335 | DR97_3569 | Putative two-component sensor; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Probably functions as a sensor kinase that phosphorylates AruR | annotation not available | 0.927 |
aruS | DR97_3759 | DR97_2335 | DR97_3759 | Putative two-component sensor; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Probably functions as a sensor kinase that phosphorylates AruR | annotation not available | 0.852 |
aruS | bvgS | DR97_2335 | DR97_3920 | Putative two-component sensor; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Probably functions as a sensor kinase that phosphorylates AruR | annotation not available | 0.869 |
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