Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CoxG | DR97_1469 | DR97_3064 | DR97_1469 | annotation not available | annotation not available | 0.527 |
CoxG | DR97_1829 | DR97_3064 | DR97_1829 | annotation not available | Conserved hypothetical protein | 0.620 |
CoxG | DR97_3942 | DR97_3064 | DR97_3942 | annotation not available | annotation not available | 0.706 |
CoxG | DR97_4716 | DR97_3064 | DR97_4716 | annotation not available | annotation not available | 0.617 |
CoxG | eddA | DR97_3064 | DR97_3956 | annotation not available | annotation not available | 0.638 |
CoxG | flp | DR97_3064 | DR97_1481 | annotation not available | annotation not available | 0.603 |
CoxG | oprO | DR97_3064 | DR97_4650 | annotation not available | Pyrophosphate-specific outer membrane porin; Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate | 0.584 |
CoxG | tadG | DR97_3064 | DR97_1472 | annotation not available | annotation not available | 0.635 |
DR97_1469 | CoxG | DR97_1469 | DR97_3064 | annotation not available | annotation not available | 0.527 |
DR97_1469 | DR97_3942 | DR97_1469 | DR97_3942 | annotation not available | annotation not available | 0.428 |
DR97_1469 | DR97_4716 | DR97_1469 | DR97_4716 | annotation not available | annotation not available | 0.426 |
DR97_1469 | eddA | DR97_1469 | DR97_3956 | annotation not available | annotation not available | 0.440 |
DR97_1469 | flp | DR97_1469 | DR97_1481 | annotation not available | annotation not available | 0.640 |
DR97_1469 | oprO | DR97_1469 | DR97_4650 | annotation not available | Pyrophosphate-specific outer membrane porin; Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate | 0.520 |
DR97_1469 | rcpA | DR97_1469 | DR97_1479 | annotation not available | Bacterial type ii and iii secretion system family protein; Belongs to the bacterial secretin family | 0.880 |
DR97_1469 | tadG | DR97_1469 | DR97_1472 | annotation not available | annotation not available | 0.923 |
DR97_1469 | tadZ | DR97_1469 | DR97_1478 | annotation not available | annotation not available | 0.854 |
DR97_1829 | CoxG | DR97_1829 | DR97_3064 | Conserved hypothetical protein | annotation not available | 0.620 |
DR97_1829 | DR97_3942 | DR97_1829 | DR97_3942 | Conserved hypothetical protein | annotation not available | 0.632 |
DR97_1829 | DR97_4716 | DR97_1829 | DR97_4716 | Conserved hypothetical protein | annotation not available | 0.750 |
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