DR97_1493 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_1493

annotation not available (245 aa)

Predicted Functional Partners:

DR97_2353

0.851

amiS

0.720

chpE

0.660

DR97_2899

0.647

DR97_1496

0.637

DR97_1497

0.637

DR97_1494

0.624

DR97_6371

0.615

DR97_1495

0.610

DR97_1499

0.562

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1493	DR97_1494	DR97_1493	DR97_1494	annotation not available	annotation not available	0.624
DR97_1493	DR97_1495	DR97_1493	DR97_1495	annotation not available	Uncharacterized protein	0.610
DR97_1493	DR97_1496	DR97_1493	DR97_1496	annotation not available	DUF4129 domain-containing protein	0.637
DR97_1493	DR97_1497	DR97_1493	DR97_1497	annotation not available	Uncharacterized protein	0.637
DR97_1493	DR97_1499	DR97_1493	DR97_1499	annotation not available	annotation not available	0.562
DR97_1493	DR97_2353	DR97_1493	DR97_2353	annotation not available	annotation not available	0.851
DR97_1493	DR97_2899	DR97_1493	DR97_2899	annotation not available	Uncharacterized protein	0.647
DR97_1493	DR97_6371	DR97_1493	DR97_6371	annotation not available	Conserved hypothetical protein	0.615
DR97_1493	amiS	DR97_1493	DR97_4565	annotation not available	annotation not available	0.720
DR97_1493	chpE	DR97_1493	DR97_3385	annotation not available	annotation not available	0.660
DR97_1494	DR97_1493	DR97_1494	DR97_1493	annotation not available	annotation not available	0.624
DR97_1494	DR97_1495	DR97_1494	DR97_1495	annotation not available	Uncharacterized protein	0.996
DR97_1494	DR97_1496	DR97_1494	DR97_1496	annotation not available	DUF4129 domain-containing protein	0.979
DR97_1494	DR97_1497	DR97_1494	DR97_1497	annotation not available	Uncharacterized protein	0.975
DR97_1494	DR97_1499	DR97_1494	DR97_1499	annotation not available	annotation not available	0.975
DR97_1495	DR97_1493	DR97_1495	DR97_1493	Uncharacterized protein	annotation not available	0.610
DR97_1495	DR97_1494	DR97_1495	DR97_1494	Uncharacterized protein	annotation not available	0.996
DR97_1495	DR97_1496	DR97_1495	DR97_1496	Uncharacterized protein	DUF4129 domain-containing protein	0.985
DR97_1495	DR97_1497	DR97_1495	DR97_1497	Uncharacterized protein	Uncharacterized protein	0.973
DR97_1495	DR97_1499	DR97_1495	DR97_1499	Uncharacterized protein	annotation not available	0.977

page 1 of 3

Network

Neighborhood

Textmining

Fusion

Experiments

Cooccurrence

Databases

Coexpression

© STRING Consortium 2019

Credits

Access

Info

About