Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1521 | DR97_1522 | DR97_1521 | DR97_1522 | Ycei-like domain protein; Belongs to the UPF0312 family | Hypothetical protein; Amidase | 0.685 |
DR97_1521 | DR97_1523 | DR97_1521 | DR97_1523 | Ycei-like domain protein; Belongs to the UPF0312 family | annotation not available | 0.694 |
DR97_1521 | DR97_1524 | DR97_1521 | DR97_1524 | Ycei-like domain protein; Belongs to the UPF0312 family | annotation not available | 0.503 |
DR97_1522 | DR97_1521 | DR97_1522 | DR97_1521 | Hypothetical protein; Amidase | Ycei-like domain protein; Belongs to the UPF0312 family | 0.685 |
DR97_1522 | DR97_1523 | DR97_1522 | DR97_1523 | Hypothetical protein; Amidase | annotation not available | 0.952 |
DR97_1522 | DR97_1524 | DR97_1522 | DR97_1524 | Hypothetical protein; Amidase | annotation not available | 0.638 |
DR97_1522 | DR97_1525 | DR97_1522 | DR97_1525 | Hypothetical protein; Amidase | annotation not available | 0.547 |
DR97_1522 | LipG | DR97_1522 | DR97_4353 | Hypothetical protein; Amidase | annotation not available | 0.483 |
DR97_1522 | algE | DR97_1522 | DR97_4398 | Hypothetical protein; Amidase | Alginate production outer membrane protein; Has non-porin-like, channel-forming properties and probably functions as an alginate permeability pore | 0.779 |
DR97_1522 | algG | DR97_1522 | DR97_4397 | Hypothetical protein; Amidase | Poly(beta-d-mannuronate) c5 epimerase; Catalyzes the epimerization of beta-D-mannuronate to alpha-L- guluronate during the synthesis of the linear polysaccharide alginate . In addition, is part of a periplasmic protein complex that protects alginate from degradation by AlgL by channeling the newly formed alginate polymer through a scaffold that transfers the alginate polymer through the periplasmic space to the outer membrane secretin AlgE | 0.779 |
DR97_1522 | algK | DR97_1522 | DR97_4399 | Hypothetical protein; Amidase | Alginate biosynthesis protein algk; May be involved in the polymerization of mannuronate to alginate | 0.781 |
DR97_1523 | DR97_1521 | DR97_1523 | DR97_1521 | annotation not available | Ycei-like domain protein; Belongs to the UPF0312 family | 0.694 |
DR97_1523 | DR97_1522 | DR97_1523 | DR97_1522 | annotation not available | Hypothetical protein; Amidase | 0.952 |
DR97_1523 | DR97_1524 | DR97_1523 | DR97_1524 | annotation not available | annotation not available | 0.662 |
DR97_1523 | DR97_1525 | DR97_1523 | DR97_1525 | annotation not available | annotation not available | 0.496 |
DR97_1523 | DR97_1526 | DR97_1523 | DR97_1526 | annotation not available | annotation not available | 0.533 |
DR97_1523 | DR97_1528 | DR97_1523 | DR97_1528 | annotation not available | annotation not available | 0.544 |
DR97_1523 | LipG | DR97_1523 | DR97_4353 | annotation not available | annotation not available | 0.519 |
DR97_1523 | algE | DR97_1523 | DR97_4398 | annotation not available | Alginate production outer membrane protein; Has non-porin-like, channel-forming properties and probably functions as an alginate permeability pore | 0.522 |
DR97_1523 | algG | DR97_1523 | DR97_4397 | annotation not available | Poly(beta-d-mannuronate) c5 epimerase; Catalyzes the epimerization of beta-D-mannuronate to alpha-L- guluronate during the synthesis of the linear polysaccharide alginate . In addition, is part of a periplasmic protein complex that protects alginate from degradation by AlgL by channeling the newly formed alginate polymer through a scaffold that transfers the alginate polymer through the periplasmic space to the outer membrane secretin AlgE | 0.494 |
page 1 of 3