Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_154 | DR97_155 | DR97_154 | DR97_155 | annotation not available | annotation not available | 0.936 |
DR97_154 | DR97_156 | DR97_154 | DR97_156 | annotation not available | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | 0.948 |
DR97_154 | DR97_157 | DR97_154 | DR97_157 | annotation not available | annotation not available | 0.935 |
DR97_154 | DR97_2278 | DR97_154 | DR97_2278 | annotation not available | annotation not available | 0.762 |
DR97_154 | rplI | DR97_154 | DR97_2283 | annotation not available | Large subunit ribosomal protein l9; Binds to the 23S rRNA | 0.684 |
DR97_154 | rplP | DR97_154 | DR97_3655 | annotation not available | Large subunit ribosomal protein l16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs | 0.573 |
DR97_154 | rpmE | DR97_154 | DR97_2404 | annotation not available | Large subunit ribosomal protein l31; Binds the 23S rRNA | 0.683 |
DR97_154 | rpmE2 | DR97_154 | DR97_4338 | annotation not available | Large subunit ribosomal protein l31; L31: ribosomal protein L31 | 0.683 |
DR97_154 | rpsQ | DR97_154 | DR97_3657 | annotation not available | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.844 |
DR97_154 | rpsR | DR97_154 | DR97_2285 | annotation not available | Small subunit ribosomal protein s18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | 0.851 |
DR97_155 | DR97_154 | DR97_155 | DR97_154 | annotation not available | annotation not available | 0.936 |
DR97_155 | DR97_156 | DR97_155 | DR97_156 | annotation not available | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | 0.992 |
DR97_155 | DR97_157 | DR97_155 | DR97_157 | annotation not available | annotation not available | 0.987 |
DR97_155 | DR97_2278 | DR97_155 | DR97_2278 | annotation not available | annotation not available | 0.873 |
DR97_156 | DR97_154 | DR97_156 | DR97_154 | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | annotation not available | 0.948 |
DR97_156 | DR97_155 | DR97_156 | DR97_155 | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | annotation not available | 0.992 |
DR97_156 | DR97_157 | DR97_156 | DR97_157 | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | annotation not available | 0.994 |
DR97_156 | DR97_2278 | DR97_156 | DR97_2278 | Hypothetical protein; Uncharacterized protein; A predicted alpha-helical domain with a conserved ER motif family protein | annotation not available | 0.580 |
DR97_157 | DR97_154 | DR97_157 | DR97_154 | annotation not available | annotation not available | 0.935 |
DR97_157 | DR97_155 | DR97_157 | DR97_155 | annotation not available | annotation not available | 0.987 |
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