Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_1195 | DR97_1562 | DR97_1195 | DR97_1562 | annotation not available | annotation not available | 0.473 |
| DR97_1426 | DR97_1562 | DR97_1426 | DR97_1562 | annotation not available | annotation not available | 0.456 |
| DR97_1426 | DR97_5139 | DR97_1426 | DR97_5139 | annotation not available | annotation not available | 0.537 |
| DR97_1559 | DR97_1562 | DR97_1559 | DR97_1562 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.534 |
| DR97_1559 | crcB | DR97_1559 | DR97_1561 | Hypothetical protein; Uncharacterized protein | Crcb-like family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity | 0.919 |
| DR97_1562 | DR97_1195 | DR97_1562 | DR97_1195 | annotation not available | annotation not available | 0.473 |
| DR97_1562 | DR97_1426 | DR97_1562 | DR97_1426 | annotation not available | annotation not available | 0.456 |
| DR97_1562 | DR97_1559 | DR97_1562 | DR97_1559 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.534 |
| DR97_1562 | DR97_5139 | DR97_1562 | DR97_5139 | annotation not available | annotation not available | 0.520 |
| DR97_1562 | crcB | DR97_1562 | DR97_1561 | annotation not available | Crcb-like family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity | 0.494 |
| DR97_1562 | lasA | DR97_1562 | DR97_4 | annotation not available | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | 0.500 |
| DR97_1562 | rhlI | DR97_1562 | DR97_4445 | annotation not available | Autoinducer synthetase family protein; Required for the synthesis of BHL (N-butanoyl-L-homoserine lactone), and HHL (N-hexanoyl-L-homoserine lactone) autoinducer molecules which bind to RhlR and thus acts in elastase biosynthesis regulation | 0.412 |
| DR97_1562 | spdH | DR97_1562 | DR97_4164 | annotation not available | annotation not available | 0.439 |
| DR97_5139 | DR97_1426 | DR97_5139 | DR97_1426 | annotation not available | annotation not available | 0.537 |
| DR97_5139 | DR97_1562 | DR97_5139 | DR97_1562 | annotation not available | annotation not available | 0.520 |
| crcB | DR97_1559 | DR97_1561 | DR97_1559 | Crcb-like family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity | Hypothetical protein; Uncharacterized protein | 0.919 |
| crcB | DR97_1562 | DR97_1561 | DR97_1562 | Crcb-like family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity | annotation not available | 0.494 |
| lasA | DR97_1562 | DR97_4 | DR97_1562 | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | annotation not available | 0.500 |
| lasA | rhlI | DR97_4 | DR97_4445 | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | Autoinducer synthetase family protein; Required for the synthesis of BHL (N-butanoyl-L-homoserine lactone), and HHL (N-hexanoyl-L-homoserine lactone) autoinducer molecules which bind to RhlR and thus acts in elastase biosynthesis regulation | 0.880 |
| rhlI | DR97_1562 | DR97_4445 | DR97_1562 | Autoinducer synthetase family protein; Required for the synthesis of BHL (N-butanoyl-L-homoserine lactone), and HHL (N-hexanoyl-L-homoserine lactone) autoinducer molecules which bind to RhlR and thus acts in elastase biosynthesis regulation | annotation not available | 0.412 |
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