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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttg2Dannotation not available (215 aa)    
Predicted Functional Partners:
DR97_1632
annotation not available
 
 0.997
DR97_1634
annotation not available
 
 
 0.985
DR97_1633
Phospholipid/cholesterol/gamma-hch transport system permease protein; Putative Phospholipid ABC transporter permease protein MlaE
 
 
 0.984
DR97_1630
annotation not available
 
  
 0.982
DR97_4722
annotation not available
  
 0.906
YrbF
annotation not available
  
 
 0.868
YrbE
Phospholipid/cholesterol/gamma-hch transport system permease protein; Putative phospholipid ABC transporter permease protein MlaE
  
 
 0.859
argA
Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily
   
    0.794
DR97_1629
Bola-like family protein; Belongs to the BolA/IbaG family
 
    0.783
lolA
Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
  
  
 0.756
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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