Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1646 | DR97_1648 | DR97_1646 | DR97_1648 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.801 |
DR97_1646 | DR97_1650 | DR97_1646 | DR97_1650 | annotation not available | annotation not available | 0.690 |
DR97_1646 | fumC2 | DR97_1646 | DR97_1649 | annotation not available | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | 0.791 |
DR97_1646 | pigA | DR97_1646 | DR97_1447 | annotation not available | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.520 |
DR97_1646 | pmbA | DR97_1646 | DR97_1651 | annotation not available | annotation not available | 0.404 |
DR97_1646 | sodA | DR97_1646 | DR97_1647 | annotation not available | Superoxide dismutase, fe-mn family; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems | 0.879 |
DR97_1648 | DR97_1646 | DR97_1648 | DR97_1646 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.801 |
DR97_1648 | DR97_1650 | DR97_1648 | DR97_1650 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.970 |
DR97_1648 | DR97_6029 | DR97_1648 | DR97_6029 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein; Putative pA2404 | 0.636 |
DR97_1648 | FiuI | DR97_1648 | DR97_3440 | Hypothetical protein; Uncharacterized protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.654 |
DR97_1648 | femI | DR97_1648 | DR97_5934 | Hypothetical protein; Uncharacterized protein | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.583 |
DR97_1648 | fptA | DR97_1648 | DR97_3690 | Hypothetical protein; Uncharacterized protein | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid; High-affinity outer membrane receptor required for the transport of Fe(3+)-pyochelin | 0.549 |
DR97_1648 | fumC2 | DR97_1648 | DR97_1649 | Hypothetical protein; Uncharacterized protein | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | 0.902 |
DR97_1648 | pigA | DR97_1648 | DR97_1447 | Hypothetical protein; Uncharacterized protein | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.569 |
DR97_1648 | pmbA | DR97_1648 | DR97_1651 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.549 |
DR97_1648 | sodA | DR97_1648 | DR97_1647 | Hypothetical protein; Uncharacterized protein | Superoxide dismutase, fe-mn family; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems | 0.943 |
DR97_1650 | DR97_1646 | DR97_1650 | DR97_1646 | annotation not available | annotation not available | 0.690 |
DR97_1650 | DR97_1648 | DR97_1650 | DR97_1648 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.970 |
DR97_1650 | DR97_6029 | DR97_1650 | DR97_6029 | annotation not available | Hypothetical protein; Uncharacterized protein; Putative pA2404 | 0.557 |
DR97_1650 | fumC2 | DR97_1650 | DR97_1649 | annotation not available | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | 0.958 |
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