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dppD protein (Pseudomonas aeruginosa) - STRING interaction network
"dppD" - oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppDoligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (324 aa)    
Predicted Functional Partners:
dppC
annotation not available (303 aa)
  0.999
dppB
annotation not available (336 aa)
  0.999
dppF
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (323 aa)
 
0.992
dppA3
annotation not available (531 aa)
  0.988
dppA9
annotation not available (537 aa)
  0.981
dppA5
annotation not available (533 aa)
  0.969
dppA7
annotation not available (532 aa)
  0.961
dppA1
annotation not available (526 aa)
 
  0.882
yejE3
annotation not available (338 aa)
     
  0.635
yejB3
annotation not available (357 aa)
     
  0.625
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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