STRINGSTRING
DR97_1702 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_1702" - Thymidine phosphorylase in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1702Thymidine phosphorylase (751 aa)    
Predicted Functional Partners:
chpC
annotation not available (158 aa)
   
          0.770
ampE
annotation not available (278 aa)
 
          0.758
DR97_908
annotation not available (186 aa)
   
          0.748
DR97_2700
DUF4124 domain-containing protein (205 aa)
   
          0.743
chpA
annotation not available (2472 aa)
 
          0.728
DR97_4845
Uncharacterized protein (467 aa)
   
     
  0.716
fimL
annotation not available (562 aa)
 
          0.703
DR97_2202
MJ0042 family finger-like domain protein; MJ0042_CXXC- MJ0042 family finger-like domain protein (425 aa)
   
          0.675
ampD
annotation not available (188 aa)
              0.665
DR97_2311
annotation not available (607 aa)
   
          0.664
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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