Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmpE | DR97_1702 | DR97_1700 | DR97_1702 | annotation not available | Hypothetical protein; Thymidine phosphorylase | 0.758 |
AmpE | ampD | DR97_1700 | DR97_1701 | annotation not available | annotation not available | 0.985 |
AmpE | chpC | DR97_1700 | DR97_3383 | annotation not available | annotation not available | 0.403 |
DR97_1702 | AmpE | DR97_1702 | DR97_1700 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.758 |
DR97_1702 | DR97_2202 | DR97_1702 | DR97_2202 | Hypothetical protein; Thymidine phosphorylase | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | 0.675 |
DR97_1702 | DR97_2700 | DR97_1702 | DR97_2700 | Hypothetical protein; Thymidine phosphorylase | Hypothetical protein; DUF4124 domain-containing protein | 0.743 |
DR97_1702 | DR97_4845 | DR97_1702 | DR97_4845 | Hypothetical protein; Thymidine phosphorylase | Hypothetical protein; Uncharacterized protein | 0.735 |
DR97_1702 | DR97_908 | DR97_1702 | DR97_908 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.748 |
DR97_1702 | ampD | DR97_1702 | DR97_1701 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.665 |
DR97_1702 | chpA | DR97_1702 | DR97_3381 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.728 |
DR97_1702 | chpC | DR97_1702 | DR97_3383 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.771 |
DR97_1702 | fimL | DR97_1702 | DR97_57 | Hypothetical protein; Thymidine phosphorylase | annotation not available | 0.703 |
DR97_1702 | fimW | DR97_1702 | DR97_2311 | Hypothetical protein; Thymidine phosphorylase | Putative gtpase-translation elongation factor; High-affinity cyclic-di-GMP binding protein that regulates type IV pili (T4P) elongation. Required for T4P-mediated surface attachment and walking motility during the early phases of surface colonization. Not required for twitching motility. Does not bind related nucleotides such as GMP, GDP, GTP or ATP | 0.664 |
DR97_2202 | DR97_1702 | DR97_2202 | DR97_1702 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | Hypothetical protein; Thymidine phosphorylase | 0.675 |
DR97_2202 | DR97_4845 | DR97_2202 | DR97_4845 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | Hypothetical protein; Uncharacterized protein | 0.648 |
DR97_2202 | DR97_908 | DR97_2202 | DR97_908 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | annotation not available | 0.420 |
DR97_2202 | chpA | DR97_2202 | DR97_3381 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | annotation not available | 0.718 |
DR97_2202 | chpC | DR97_2202 | DR97_3383 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | annotation not available | 0.757 |
DR97_2202 | fimL | DR97_2202 | DR97_57 | MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein | annotation not available | 0.726 |
DR97_2700 | DR97_1702 | DR97_2700 | DR97_1702 | Hypothetical protein; DUF4124 domain-containing protein | Hypothetical protein; Thymidine phosphorylase | 0.743 |
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