STRINGSTRING
pilA protein (Pseudomonas aeruginosa) - STRING interaction network
"pilA" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilAannotation not available (154 aa)    
Predicted Functional Partners:
pilC
annotation not available (405 aa)
 
   
  0.989
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (290 aa)
 
   
  0.986
pilB
type_IV_pilB- type IV-A pilus assembly ATPase PilB (566 aa)
 
   
  0.974
pilT
annotation not available (344 aa)
 
   
  0.970
pilU
pilT_fam- twitching motility family protein (382 aa)
   
   
  0.957
pilY1
annotation not available (1163 aa)
 
     
  0.919
pilO
annotation not available (207 aa)
 
   
  0.905
pilW
Type 4 fimbrial biogenesis protein PilW; IV_pilin_GFxxxE- prepilin-type N-terminal cleavage/methylation domain protein (274 aa)
 
     
  0.891
pilV
Type 4 fimbrial biogenesis protein; type_IV_pilV- type IV pilus modification protein PilV (185 aa)
 
     
  0.891
pilF
Uncharacterized protein; type_IV_pilW- type IV pilus biogenesis/stability protein PilW (252 aa)
   
     
  0.889
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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