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STRINGSTRING
DR97_1748 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_1748" - phage_pRha: phage regulatory , Rha family protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1748phage_pRha- phage regulatory , Rha family protein (276 aa)    
Predicted Functional Partners:
mexR
annotation not available (147 aa)
         
  0.831
DR97_1749
annotation not available (152 aa)
              0.767
DR97_4263
Tape_meas_nterm- tape measure domain protein (827 aa)
         
  0.721
DR97_1747
Uncharacterized protein (182 aa)
              0.705
DR97_1746
Integrating conjugative element protein, family (242 aa)
              0.696
oprJ
annotation not available (479 aa)
           
  0.622
amrR
annotation not available (210 aa)
           
  0.592
DR97_5397
annotation not available (180 aa)
 
     
  0.575
DR97_5073
Terminase (119 aa)
         
  0.569
bepR
annotation not available (212 aa)
           
  0.556
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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