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DR97_1820 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_1820" - TIGR03750 family conjugal transfer protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1820TIGR03750 family conjugal transfer protein (128 aa)    
Predicted Functional Partners:
DR97_1824
annotation not available (147 aa)
 
          0.965
DR97_1823
Uncharacterized protein (501 aa)
 
          0.965
DR97_1822
Integrating conjugative element protein (294 aa)
 
          0.965
DR97_1825
Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706- conjugative transfer ATPase, PFL_4706 family (980 aa)
 
          0.965
DR97_1821
Uncharacterized protein (219 aa)
 
          0.965
DR97_1819
Uncharacterized protein (118 aa)
 
          0.962
DR97_1817
Candidate type III effector Hop protein (112 aa)
 
          0.899
DR97_1828
annotation not available (219 aa)
 
          0.897
DR97_1826
Uncharacterized protein (94 aa)
              0.845
DR97_5528
Uncharacterized protein (230 aa)
   
          0.784
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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