Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_1887 | DR97_2850 | DR97_1887 | DR97_2850 | annotation not available | annotation not available | 0.683 |
| DR97_1887 | DR97_5311 | DR97_1887 | DR97_5311 | annotation not available | annotation not available | 0.608 |
| DR97_1887 | rtcA | DR97_1887 | DR97_1890 | annotation not available | RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing | 0.759 |
| DR97_1887 | rtcB | DR97_1887 | DR97_1888 | annotation not available | annotation not available | 0.932 |
| DR97_1887 | rtcR | DR97_1887 | DR97_1885 | annotation not available | annotation not available | 0.494 |
| DR97_1887 | ycgL | DR97_1887 | DR97_1889 | annotation not available | annotation not available | 0.870 |
| DR97_2850 | DR97_1887 | DR97_2850 | DR97_1887 | annotation not available | annotation not available | 0.683 |
| DR97_2850 | rtcA | DR97_2850 | DR97_1890 | annotation not available | RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing | 0.730 |
| DR97_2850 | rtcR | DR97_2850 | DR97_1885 | annotation not available | annotation not available | 0.748 |
| DR97_2850 | ycgL | DR97_2850 | DR97_1889 | annotation not available | annotation not available | 0.653 |
| DR97_5311 | DR97_1887 | DR97_5311 | DR97_1887 | annotation not available | annotation not available | 0.608 |
| DR97_5311 | rtcA | DR97_5311 | DR97_1890 | annotation not available | RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing | 0.715 |
| DR97_5311 | rtcR | DR97_5311 | DR97_1885 | annotation not available | annotation not available | 0.647 |
| DR97_5311 | ycgL | DR97_5311 | DR97_1889 | annotation not available | annotation not available | 0.582 |
| guaA | ksgA | DR97_4101 | DR97_3561 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.592 |
| guaA | rplJ | DR97_4101 | DR97_3639 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors | 0.470 |
| guaA | rtcA | DR97_4101 | DR97_1890 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing | 0.634 |
| ksgA | guaA | DR97_3561 | DR97_4101 | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.592 |
| ksgA | rplJ | DR97_3561 | DR97_3639 | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors | 0.822 |
| ksgA | rpsD | DR97_3561 | DR97_3672 | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.886 |
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