Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1536 | DR97_1583 | DR97_1536 | DR97_1583 | annotation not available | Hypothetical protein; RNA-binding protein | 0.661 |
DR97_1536 | DR97_1948 | DR97_1536 | DR97_1948 | annotation not available | Uncharacterized lipoprotein; Putative lipoprotein | 0.708 |
DR97_1536 | DR97_2015 | DR97_1536 | DR97_2015 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.781 |
DR97_1536 | DR97_2347 | DR97_1536 | DR97_2347 | annotation not available | Hypothetical protein; Metal ABC transporter ATPase | 0.781 |
DR97_1536 | DR97_3806 | DR97_1536 | DR97_3806 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.783 |
DR97_1536 | DR97_4428 | DR97_1536 | DR97_4428 | annotation not available | Hypothetical protein; Leucyl-tRNA synthetase | 0.779 |
DR97_1536 | DR97_4675 | DR97_1536 | DR97_4675 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.781 |
DR97_1536 | DR97_4739 | DR97_1536 | DR97_4739 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.778 |
DR97_1536 | DR97_489 | DR97_1536 | DR97_489 | annotation not available | Hypothetical protein; MFS transporter | 0.783 |
DR97_1536 | amrZ | DR97_1536 | DR97_4537 | annotation not available | Arc-like dna binding domain protein; Functions as both a transcriptional activator and repressor of multiple genes encoding virulence factors as well as genes involved in environmental adaptation Plays a role in alginate production via the activation of AlgD which is the first gene in the alginate biosynthetic operon . Regulates also the transcription of genes responsible for type IV pili localization and twitching motility . Mediates transition of P.aeruginosa biofilm infections from colonizing to chronic biofilms through repression of the psl operon . Represses also its own transcrip [...] | 0.760 |
DR97_1583 | DR97_1536 | DR97_1583 | DR97_1536 | Hypothetical protein; RNA-binding protein | annotation not available | 0.661 |
DR97_1583 | DR97_1948 | DR97_1583 | DR97_1948 | Hypothetical protein; RNA-binding protein | Uncharacterized lipoprotein; Putative lipoprotein | 0.764 |
DR97_1583 | DR97_2015 | DR97_1583 | DR97_2015 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Uncharacterized protein | 0.642 |
DR97_1583 | DR97_2347 | DR97_1583 | DR97_2347 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Metal ABC transporter ATPase | 0.622 |
DR97_1583 | DR97_3806 | DR97_1583 | DR97_3806 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Uncharacterized protein | 0.658 |
DR97_1583 | DR97_4428 | DR97_1583 | DR97_4428 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Leucyl-tRNA synthetase | 0.623 |
DR97_1583 | DR97_4675 | DR97_1583 | DR97_4675 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Uncharacterized protein | 0.667 |
DR97_1583 | DR97_4739 | DR97_1583 | DR97_4739 | Hypothetical protein; RNA-binding protein | Hypothetical protein; Uncharacterized protein | 0.676 |
DR97_1583 | DR97_489 | DR97_1583 | DR97_489 | Hypothetical protein; RNA-binding protein | Hypothetical protein; MFS transporter | 0.715 |
DR97_1583 | amrZ | DR97_1583 | DR97_4537 | Hypothetical protein; RNA-binding protein | Arc-like dna binding domain protein; Functions as both a transcriptional activator and repressor of multiple genes encoding virulence factors as well as genes involved in environmental adaptation Plays a role in alginate production via the activation of AlgD which is the first gene in the alginate biosynthetic operon . Regulates also the transcription of genes responsible for type IV pili localization and twitching motility . Mediates transition of P.aeruginosa biofilm infections from colonizing to chronic biofilms through repression of the psl operon . Represses also its own transcrip [...] | 0.648 |
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