STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1951annotation not available (96 aa)    
Predicted Functional Partners:
DR97_1619
Uncharacterized protein; Cytochrome D ubiquinol oxidase subunit III
  
     0.770
DR97_2202
MJ0042 family finger-like domain protein; MJ0042_CXXC: MJ0042 family finger-like domain protein
  
    0.756
DR97_3516
annotation not available
  
     0.741
DR97_2067
annotation not available
  
     0.738
DR97_98
Uncharacterized protein
  
     0.727
DR97_4928
Hypothetical protein; ABC transporter ATP-binding protein
  
     0.717
DR97_2595
annotation not available
  
     0.706
DR97_4582
annotation not available
  
     0.702
chpC
annotation not available
  
     0.698
DR97_2345
Fad dependent oxidoreductase family protein; Probably functions as a FAD-dependent oxidoreductase, whose physiological substrate is unknown. Does not display amino-acid oxidase or glycerol-3-phosphate dehydrogenase activities . Is essential for growth of P.aeruginosa in the sputum of cystic fibrosis patients
  
     0.687
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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